BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A06SP1|AL426450
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1669 1637 0.0
>3x_Contig1669
Length = 15503
Score = 1637 bits (817), Expect = 0.0
Identities = 837/853 (98%)
Strand = Plus / Minus
Query: 1 aaacctgtagagccttgaattgcggaccaaagaaacgcatacatacctgcgccattcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7033 aaacctgtagagccttgaattgcggaccaaagaaacgcatacatacctgcgccattcgct 6974
Query: 61 atgatgaatctaagtataaaataaatkaaaatgggtttcatttgaaacctctgtaaatag 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6973 atgatgaatctaagtataaaataaattaaaatgggtttcatttgaaacctctgtaaatag 6914
Query: 121 agaatacaatacaatacctagcgcgtatttttgaccacagtagggktaacattaccagga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6913 agaatacaatacaatacctagcgcgtatttttgaccacagtagggttaacattaccagga 6854
Query: 181 gtktcgactgaagttgtaccaccgctacgtgattataccttaatcctttctccaccgtaa 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6853 gtttcgactgaagttgtaccaccgctacgtgattataccttaatcctttctccaccgtaa 6794
Query: 241 gtcagggcaacgttcgtcctttgtgatatctgckgtgcaactctcttaattggggkagcc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 6793 gtcagggcaacgttcgtcctttgtgatatctgctgtgcaactctcttaattggggtagcc 6734
Query: 301 ttcagagacacctacataattctgcatataakaattcaaacatatcacctaaataactaa 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6733 ttcagagacacctacataattctgcatataataattcaaacatatcacctaaataactaa 6674
Query: 361 agcacaagaaggkccagtataatgactgckgtcatattcttgtagaacttcgtgccagcy 420
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6673 agcacaagaaggtccagtataatgactgctgtcatattcttgtagaacttcgtgccagct 6614
Query: 421 ccatctcactgtttctatctcctcattgcagtactagaatagaatattctgattaccctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6613 ccatctcactgtttctatctcctcattgcagtactagaatagaatattctgattaccctc 6554
Query: 481 cctccttttttaccctattgccaccaatagaaaaattgaaataagaacattttcgataaa 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6553 cctccttttttaccctattgtcaccaatagaaaaattgaaataagaacattttcgataaa 6494
Query: 541 agtaaaatttgatttcgaaagakctgggaaaataggaaacaaatattgtkaagtkagata 600
|||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct: 6493 agtaaaatttgatttcgaaagatctgggaaaataggaaacaaatattgttaagttagata 6434
Query: 601 gcttaatactccagagaaagagttcaaggattgavacggcgtttaagagtgccatttttg 660
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 6433 gcttaatactccagagaaagagttcaaggattgaaacggcgtttaagagttccatttttg 6374
Query: 661 tracgatacctatctcgcgtgcttttcttgttgcgagcagatactaaaattgtacttttt 720
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6373 taacgatacctatctcgcgtgcttttcttgttgcgagcagatactaaaattgtacttttt 6314
Query: 721 ttggaaagaaattatactcaacattttccaataaagcattataaaaaatttgcatacttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6313 ttggaaagaaattatactcaacattttccaataaagcattataaaaaatttgcatacttg 6254
Query: 781 cttaaacttctaagattaacaacaagcaatcagaactacttcaagagaactactactact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6253 cttaaacttctaagattaacaacaagcaatcagaactacttcaagagaactactactact 6194
Query: 841 cacgcaatccaat 853
|||||||||||||
Sbjct: 6193 cacgcaatccaat 6181
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5999
Number of Sequences: 1807
Number of extensions: 5999
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)